Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015887920.1_cds_XP_016442424.1_37690
CDS Infomation	[gene=LOC107767840] [db_xref=GeneID:107767840] [protein=protein CHUP1, chloroplastic-like] [protein_id=XP_016442424.1] [location=join(67958..69196,69911..70042,70121..70302,70443..70554,71894..72028,72152..72286)] [gbkey=CDS]
Sequence	ATGGTTGCTGGCAAAGTAAAAACGGCTATGGGTTTACAGAAATCACCTGCAAATCCAAAG CCATCAAAGCAAGATTCAGTTCCCAAGCCTCCTTCTCCTTCACCCAGCTGCACAAAACAG CAGACTACTCCCAAAAGTGCAGGATTTTCTCGCTCTTTCGGTGTTTACTTTCCCCGTTCC TCCGCCCAAGTCCAGCCTCGTCCACCGGACGTTGCAGAGCTCCTACGCTTAGTCGAAGAG TTACGTGAAAGAGAGTCCCGTTTGAAGACAGAACTCCTCGAGAAGAAACTGCTTAAAGAA TCAGTAGCTATTCTTCCAGTGTTGGAGAGTGAGATCAACCTAAAAGATGCAGAAATCGAA CGGAAAAAACGAATGATTGAATGCTTGGGAGTGGAAAATGAAAGGCTTAGACAAGAAGTG GAGATGTTGCACATTGAGCTGGTGAAGCAAAACGGGAGGCATGAAGAGAGGGTAAAAGCT ATGGAAGCTGAAATTTCTGAGCTGAAGAAAGCTAATGAAGAGTTATCAGCTCATAGGCTT GTGGATGCTGTAACAAATGGTGCTCAAAACAAATCTAACATGACCAAGTATTTGAGAAAA TGCGTGACTCAACCTAGCATTAGTGTGACTTCGAAACCAGACTGTGAGATGAAAGAGGAA ATAGTTGGTGCAATGGAAATGTGTGACAGGCCTAGGCATTCTCGGAGTAATTCCGACGAG TTAGCTGAGATATCTGCTGGCATTATGAGTTTGAGATCACGTGTTCCCCGTGTTCCTAAA CCACCACCACGGCCATCGTCGACGCTATTGCCATCATCATCCTCATCGTCGTCGTTATCT TCTTCTTCATCTTCCCCGTCATATAGTTCTTTATCAGATTCAGCTGAACGTGCTTTAGCT GAAATTTCAAACATTCCACCTCCACCACCTCCGCCGCCCACTACAGCGTCCAAAATGGTG GCAACAGTTCCTCCACCGCCGCCTCCGCCACCACCGTCAGCGGCGGTGGTCAAAACAGGC ACACCTCCACCTCCACCACCACCTCCGAAAGGATTAAAGCCTTTGCCAGCAAAGGTTAGG CGTATACCTGAAGTAGTGGAATTTTATCACTCTCTAATGCGGAGGGACTGCCGGAGAGAT TCCGGTGCCGGAGTTAGTGGTGCCGCTGATGCTCCAGCGACAGCCACGGCGAAGGATATG ATCGGAGAAATTGAGAACCGGTCTGCCTATTTACTGGCGATTAAAACAGATGTTGAGACA CAAGGAGATTTTATAAGGTTTTTGATCAAAGAAGTGGAAAATGCTGCATTCGCAGATATT GAGGATGTTGTGCCTTTTGTAAAATGGCTTGATGATGAGCTCTCTTACCTGGTTGATGAA AGGGCTGTTCTGAAACACTTCGAATGGCCGGAGCAAAAGGCTGATGCATTGAGAGAAGCT GCATTTGGATATTGTGATCTAAAGAAACTTGAATCTGAGGCATCCTCCTTTCGCGACAAT CCCAGACAACCTTGTGGCACAGCTCTTAAGAAAATGCAGGCCTTATTTGAGAAATTAGAG CATGGACTTTACAATTTGTCAAGAATGAGAGAATCAGCTTCAAAGAGATATAAAGTATTC CAAATTCCAATTGAGTGGATGCTGGATACTGGTTATGTTACTCAGATAAAGCTGGCATCA GTAAAATTAGCCATGAAGTACATGAAGAGGGTATCCGCAGAGTTAGAAATGGTTGGTGGT GGTCCCGAAGAAGAAGAGCTTATGATTCAAGGCGTTAGGTTTGCCTTTCGAGTACATCAG TTTGCGGGAGGTTTTGATGTGGAGACAATGAGAGCATTCCAAGAGTTGAGAGACAAAGCA ACATCTTGCCATGTACAATGTCAAAATCAGCAACAGCAGCAACACAAATATGTTTGCAGA TTTACACCTTGCTAA

Peptide Sequence

PEP ID	XP_016442424.1
PEP Infomation	PREDICTED: protein CHUP1, chloroplastic-like [Nicotiana tabacum]
Sequence	MVAGKVKTAMGLQKSPANPKPSKQDSVPKPPSPSPSCTKQQTTPKSAGFSRSFGVYFPRS SAQVQPRPPDVAELLRLVEELRERESRLKTELLEKKLLKESVAILPVLESEINLKDAEIE RKKRMIECLGVENERLRQEVEMLHIELVKQNGRHEERVKAMEAEISELKKANEELSAHRL VDAVTNGAQNKSNMTKYLRKCVTQPSISVTSKPDCEMKEEIVGAMEMCDRPRHSRSNSDE LAEISAGIMSLRSRVPRVPKPPPRPSSTLLPSSSSSSSLSSSSSSPSYSSLSDSAERALA EISNIPPPPPPPPTTASKMVATVPPPPPPPPPSAAVVKTGTPPPPPPPPKGLKPLPAKVR RIPEVVEFYHSLMRRDCRRDSGAGVSGAADAPATATAKDMIGEIENRSAYLLAIKTDVET QGDFIRFLIKEVENAAFADIEDVVPFVKWLDDELSYLVDERAVLKHFEWPEQKADALREA AFGYCDLKKLESEASSFRDNPRQPCGTALKKMQALFEKLEHGLYNLSRMRESASKRYKVF QIPIEWMLDTGYVTQIKLASVKLAMKYMKRVSAELEMVGGGPEEEELMIQGVRFAFRVHQ FAGGFDVETMRAFQELRDKATSCHVQCQNQQQQQHKYVCRFTPC

Transcript Sequence

Gene sequence data has not been registered.